Recently published apps

We have just published two Bowtie2 2.4.5 (CWL 1.2) tools:

• Bowtie2 Indexer, for building a Bowtie index from a set of DNA sequences.
• Bowtie2 Aligner, for performing end-to-end read alignment.

On top of that, there are two more additions to our Public Apps gallery:

• RSeQC – Junction Saturation 5.0.1 (CWL 1.2) tool for determining if the sequencing depth is sufficient to perform alternative splicing.
• GATK IndexFeature 4.2.5.0 tool.

Marko Marinkovic