Recently published apps
We’ve just published four tools from the OncoGEMINI 1.0.0 toolkit:
OncoGEMINI Bottleneck that identifies somatic variants with increasing allele frequency in longitudinal data.
OncoGEMINI Loh, a command tool that performs loss of heterozygosity analysis.
OncoGEMINI Truncal that recovers variants that appear in all tumor samples, but are absent in the normal sample.
OncoGEMINI Unique tool for identifying somatic variants unique to a subset of samples.